Publications of Dr. Shunnosuke Abe.    05/06/15 23:46

Publications related to biophysics  Molecular Cell Biology Home (English) -->Japanese

 Division of Biophysics       End of this list    Other publications and abstracts   Meetings (Summary)   Current Publication Status

 

Current Publication Status: (05/06/15)

2005: Published 1 (in press 1)

2004: Published  4 (in press 2)

2003:  Published 9

Submitted, 2  In preparation,   5

2002  Published,  6;   

2001/1            Published 5   

2000/1−/12   Published 1

 


65. Shunnosuke Abe, Pi-Lin Wang, Fuminori Takahashi and Eiji Sasaki (2005). Structural analysis of cDNAs coding for 4SNc-Tudor domain protein from fish and their expression in yellowtail organs. Marine Biotechnology 2005, in press.

64. Shunnosuke Abe, Chhoun Chamnan, Kenichi Miyamoto, Yasutaka Minamino, and Makoto Nouda (2005). .Isolation and identification of 3-methylcrotonyl CoA carboxylase cDNAs and pyruvate carboxylase, and their expression in red seabream, Pagrus major organs.  Marine Biotechnology 2005 6(6)

.63. Shunnosuke Abe, Shigeki Chiba, Neena Mishra, Yasutaka Minamino, Hiroko Nakasuji Masanori Doi and Todd A. Gray.  Origin and evolution of the genomic region encoding RAF1, MKRN2, PPARG, and SYN2 in human chromosome 3p25. Marine Biotechnology Volume 6S.    2004. S404-S412.

62. Magdalena Karamac,  Ryszard Amarowicz*, Stanislaw Weidner1, Shunnosuke Abe2 and Fereidoon Shahidi3. (2004). Antioxidant Activity of Triticale Caryopses and Embryos Extracts.  Food Sci. Biotechnol. Vol. 13, No. 4, pp. 000 ~ 000 (2004)

61.  Satoshi Kuroda, Yukio Hirose, Masaya Shiraishi, Eric Davies, Shunnosuke Abe. Co-expression of an ethylene receptor gene, ERS1, and ethylene signaling regulator gene, CTR1, in Delphinium during abscission of florets   Plant Physiology and Biochemistry 42:745-751 (2004)..

To Number 60 and older

 

 


 

 

Thesis

Electrophysiological Studies on Cytoplasmic Membrane of Plant Cells
and Protoplasts. Thesis Kyoto University, 1982 pp98
 written in English



Publications: books



2 Davies E, Abe S. Methods for isolation and analysis of polyribosomes
(Chapter 15). In Methods in Plant Cell Biology, Part B in Methods in Cell Biology,
vol 50 (David Berl-Hahn ed), pp. 209-222, Academic press Inc, USA (1995)
ISBN 0-120-273872-1.
 
3 Abe S and Davies E. Methods for isolation and analysis of the cytoskeleton
(Chapter 16). In Methods in Plant Cell Biology, Part B in Methods in Cell
Biology, vol 50 (David Berl-Hahn ed), pp. 223-236, Academic press Inc, USA (1995), ISBN 0-120-273872-1
(1995).

4 Davies E, Fillingham BD, Abe S. The plant cytoskeleton. In The Cytoskeleton vol 3:
Cytoskeleton in specialized tissues and pathological states (J.E.
Hesketh and L.F. Pryme eds.pp.405-449 JAI press (1996) Inc. (1996) USA,
ISBN:1-55938-689-4
 

5. 阿部 俊之助 "植物における遺伝子発現とシグナルトランスダクション
における細胞骨格の役割
"  遺伝子の構造と機能 64節、 駒野 徹偏 
(1998) 




Publications, original papers

1. Senda, M., J. Takeda, S. Abe and T. Nakamura. Induction of cell 
fusion of plant protoplasts by electrical stimulation. Plant Cell Physiology 20:
1441-1443 (1979)

2. Abe, S., J. Takeda, and M. Senda. Resting membrane potential and
action potential of Nitella expansa protoplasts. Plant Cell Physiology 21: 537-
546 (1980).

3 Takeda, J., S. Abe, and M. Senda. Electrophysiological membrane
properties of cultured cells of N. tabacum var. Samsun. In Plant Tissue Culture,
ed. A. Fujiwara (1982),
 The Japanese Association for Plant Tissue Culture,
p627-628.

4. Takeda, J., S. Abe, H. Morikawa, and M. Senda. Membrane potentials 
of heterotrophycally cultured tobacco cells. Plant and Cell Physiology 24: 667-
676 (1983).

5. Abe, S. and E. Davies. Quantitative isolation of undegraded polysomes from
aged pea tissue in the absence of contaminants and
 artefacts. Plant Cell
Physiology 26: 1499-1509 (1985).

6. Abe, S. and J. Takeda. The membrane potential of enzymatically 
isolated Nitella expansa protoplasts as compared with their intact cells.
Journal of Experimental Botany 37: 238-252 (1986).

7. Abe, S. amd J. Takeda. Possible involvement of calmodulin and
 the
cytoskeleton in electrofusion of plant protoplasts. Plant
 Physiology 81: 1151-
1155 (1986).

8. Abe, S. and E. Davies. Quantitative analysis of polysomes using a 
baseline from uncentrifuged blank gradients. Memoirs of the College of
Agriculture, Ehime University 31: 187-199 (1986)

9. Davies, E., K.V.A. Ramaiah, and S. Abe. Wounding inhibits protein 
synthesis yet stimulates polysome formation in aged excised pea epicotyls.
Plant Cell Physiology 28: 1377-1386 (1986).

10. Abe, S., H. Matsumoto, Y. Yamano, T. Komano, and E. Davies. Rapid 
isolation and concentration of nucleic acids using lanthanide precipitation.
Agricultural Biological Chemistry 51: 1729-1731 (1987)

11. Matsumoto, H., S. Abe, and J. Takeda. Changes of polysomes in
cucumber plant due to Ca
2+ deficiency. Plant Cell Physiology 28: 1153-1157
(1987).

12. Abe, S. and J. Takeda. Effect of La3+ on surface charges,
dielectrophoresis, and electrofusion of barley protoplasts. Plant Physiology 87:
389-394 (1988).

13. Abe, S. and J. Takeda. Promotion by calcium ions and cytochalasin 
D of the rounding up process (spherulation) of electrofused  barley protoplasts
and its relation to the cytoskeleton. Journal
 of Experimental Botany 40: 819-
826 (1989).

14. Davies, E. and S. Abe. Isolation and role for cytoskeleton-bound 
polysomes in a variety of plants. Plant physiology 89: 71(1989) 15. Abe, S., B.
Fillingham, and E. Davies. Isolation and role for cytoskeleton-bound polysomes
from etiolated pea stems. Plant
 Physiology 89: 71 (1989).

15. Tamai, Y., T. Ishikawa, S. Abe, and Y. Watanabe. A Method for the 
induction of tumor-resistant mice by immunization with diethylpyrocarbonate-
treated tumor cells. Agricultural Biological
 Chemistry 53: 289-291(1989).

16. Kuwabara, Y., S. Tanaka, M. Maruyama, H. Kadowaki, Y. Watanabe, S. 
Abe, and Y. Tamai. An activator stimulating the hydrolysis of 
phospholipids by phospholipase B from Torulaspora delbrueckii 
Agricultural Biological Chemistry 53: 1789-1795 (1989)

17. Davies, E., S. Abe, E.C. Comer, B.D. Fillingham, J.M. Lionberger, JP. Meyer, and
W. You. Cytoskeleton-bound polysomes in plants. Do
 they exist? Journal of
Cellular Biochemistry 14A: B403.

18. Takeda, J. and S. Abe. Effect of trans-cinnamic acid on mRNA levels 
and activities of light induced anthocyanin synthesizing enzymes of carrot cell
suspension. 7th International Congress on PlantTissue and Cell Culture (1990),
Abstract: C8-35.

19. 内村裕之、平田智法、阿部俊之助。 胚の発生速度に応じたアコヤガイ
三倍体作出方法の試み。 水産育種 
15 (1990): 39-44

21 Abe S, Davies E. Isolation of F-actin from pea stems: Evidence from 
fluorescence microscopy. Protoplasma 163: 51-61.(1991)

20 Abe S, You W, Davies E. Protein bodies in corn endosperm are enclosed by
and enmeshed in F-actin. Protoplasma 165: 139-149 (1991).

22 Davies E, Fillingham BD, Ito Y, Abe S. Polyribosomes from peas. VII.
Initial characterization of a population of polysomes associated with the
cytoskeleton. Cell Biology International Reports 15: 973-981 (1991).

23 Takeda J, Abe S, Light-induced synthesis of anthocyanin in carrot cells in 
suspension. IV. action spectrum. Photobiology and Photochemistry, 56: 69-
74 (1992).

24 Abe S. Ito Y. Davies E. Cosedimentation of actin, tubulin and membranes in
the cytoskeleton fractions from peas and mouse 3T3 cells. Journal of
Experimental Botany, 43(252): 941-949 (1992).

25 You W, Abe S, Davies E. Cosedimentation of pea root polysomes with the
cytoskeleton. Cell Biology International Reports, 16: 663-673 (1992).

26 Abe S, Ito Y, Davies E. The presence of latent RNase activity in, and
release of undegraded polysomes from, a cytoskeletal fraction from peas.
Memoirs of College of Agreculture, Ehime Univ. 37: 11-25 (1992).

27. Davies E, Comer EC, Lionberger JM, Stankovic B, Abe S. Cytoskeleton-
bound
 polysomes in plants. III. Polysome-cytoskeleton-membrane interactions
in corn endosperm. Cell Biology International 17:331-340 (1993).

28. Takeda J, Abe S, Hirose Y, Ozeki Y. Effect of light and 2,4-dichloropheー  
noxyacetic acid on the level of mRNAs for phenylalanin ammonia-lyase and
Chalconsyntase in carrot cells cultured in suspension. Physiologia
Plantarum, 89: 1-10 (1993).

29. Stankovic B, Abe S, Davies E. Co-localization of polysomes, cytoskeleton,
and membranes with protein bodies from corn endosperm. Protoplasma 177:
66-72 (1993).

30. Ito Y, Abe S, E Davies. Colocalization of cytoskeleton proteins and
polysomes with a membrane fraction from peas. Journal of Experimental
Botany 45(271): 253-259 (1994).

31. Abe S, Ito Y, Davies E. Association of cytoskeletal proteins in the
membrane-bound polysome fraction from peas using conventional polysome
isolation buffers. Plant Physiology and Biochemistry 32 (4): 547-554 (1994).

32 内村祐之、阿部俊之助。 サイトカラシンBの副作用を受けたアコヤ貝
胚の発生段階。水産増殖 
42(3): 447-452 (1994).

33 Abe S, Ito Y, Davies E. Isolation of a heparin sensitive, ribosome
sedimenting factor from the cytoskeleton fractions of peas and corn. Plant
Physiology and Biochemistry 33(4): 463-470 (1995).

34 内村祐之、平田智法、阿部俊之助。 三倍体アコヤガイの養殖特性と真
珠特性。水産増殖43巻2号 225ー228
(1995)

35 内村裕之、阿部俊之助* 三倍体アコヤガイにおける真珠の真珠層の成
長。水産増殖43巻4号、483ー489
(1995)

36. Abe S., Ito Y., Doi H., Shibata K., Azama K., and Davies E. Distribution of actin
and tubulin in the cytoskeletal fraction from a variety of plant and animal tissues.
Memoir of College of Agriculture, Ehime University (1996)41(1):1-10.


37. Davies E., Abe S., Larkins B.A., Crox, Quatrano, Weidner. The role of the
cytoskeleton in translation. Plant Physiology, 1997, in press

38 Stankovic B., Davies E., Abe S., Clore A.M., Dannenhoffer J.M., Larkins
 B.A. 
Cytoskeleton-bound polysomes in plants.. Procedings of Current Topics in
Plant Biochemistry, Physiology and Molecular Biology 1997
 

39. E. Davies, S. Abe, B.A. Larkins, A.M. Clore, R.S. Quatano and S. Weidner. 1998. The role of the cytoskeleton in plant protein synthesis. In: A Look Beyond Transcription: Mechanisms determining mRNA Stability and Translation in Plants. J. Bailey-Serres, D.R. Gallie, eds. ASPP pp. 115-124.

37. Bratislav Stankovic,*, Shunnosuke Abe, Kishu Azama, Koichi Shibata, Yoko Ito, Stanislaw Weidner, Eric Davies    Associations of maize protein bodies with cytoskeleton, membranes, and ribosomes in the endosperm of wild type and opaque-2 mutant  Acta. Phygiologiae Plantarum, 21(4): 383-389,  1999,

38. K. Shibata, Y. Morita, S Abe, B. Stankovic, and E. Davies: Apyrase from pea stems: Isolation, purification, characterization and identification of an NTPase from the cytoskeleton fraction of pea stem tissue.  Plant Physiology and Biochemistry, 37(12):1-8, 1999.

39 Stankovic B Clore A, Larkins BA, Abe S, Davies E (2000) Actin in protein synthesis and protein body formation. In: Actin: A dynamic framework for multiple plant cell functions. Baluska, Barlow, Staiger, Volkmann, eds. Kluwer Academic Publishers. Invited Review.

40 Davies E, Stankovic B, Azama K, Shibata K, Abe S  Novel components of   the plant cytoskeleton: A beginning to plant "cytomics "Plant Science. Invited Review, Plant Science (160)2 (2001) pp. 185-196.

41. Shibata, K., Abe, S., and Davies, E. Structure of the coding region and mRNA variants of the apyrase from Pisum Sativum . Acta. Phygiologiae Plantarum, vol 20(1): 3-13.

42. Obata,K., Fukuda,T., Morishita,R., Abe,S., Asakawa,S., Yamaguchi,S., Yoshino,M., Ihara,K., Murayama,K., Shigemoto,K., Shimizu,N. and Kondo,I. Human Biotin-Containing Subunit of 3-Methylcrotonyl-CoA Carboxylase Gene (MCCA): cDNA Sequence, Genomic Organization, Localization to Chromosomal Band 3q27, and Expression. Genomics 72, 145-152 (2001) Abstract: http://www.idealibrary.com/links/doi/10.1006/geno.2000.6366

43 T Gray, K Azama, A. Min, M Drumm, S. Abe, and Rob Nicholls.,   Phylogenetic conservation of the MAKORIN2 gene, encoding a multiple zinc-finger-protein, antisense to the c-RAF proto-oncogene  Genomics, 77(3): 119-126

44 Stanislav Weidner, Ewa Fraquczek, Rystard Amarowicz, Shunnosuke Abe.   Alterations in phenolic acids content in developing rye grains in normal environment and during enforced dehydration,  Acta Physiologiae Plantarum 23(4)2001:475-482

45. K. Shibata, S. Abe, M. Yoneda, E. Davies The sub-cellular distribution and isotypes of a 49-kDa apyrase from Pisum sativum  Plant Pysiology and Biochemistry, 40 (5):407-415, May 2002.

46. Stanislaw Weidner, Urszula Krupa, Ryszard Amarowicz, Magdalena Karamac & Shunnosuke Abe. Phenolic compounds in embryos of triticale caryopses at different stages of development and maturation in normal environment and after dehydration treatment. Euphytica 126: 115-122

47. S. ABE, M.F.M. MOUSTAFA, K. SHIBATA, M. YONEDA, E. DAVIES.   Purification and characterization of the major isotypes of apyrase from the cytoskeleton fraction in Pisum sativum  Plant Physiology and Biochemistry, volume 40 (2002,):1019-1023.

48   Amarowicz R., Karamac M., Weidner S., Abe S., Shahidi F. 2002. Antioxidant activity of caryopses and embryos extracts. Int. J. Food Lipids 9: 201-210.

49. Karamac M., Amarowicz R., Weidner S., Abe S., Shahidi F. 2002. Antioxidant activity of rye caryopses and embryos extracts. Czech J. Food Sci. 20: 209 ・214.

50. Mahmoud F.M. Moustafa, M. Yoneda, S Abe, M. Shiraishi.. Expression of apyrase protein and its isotypes in early stage of dark-grown seedlings of pea (Pisum sativum L. var. Alaska).    Proc 2nd Int. Conf. Biol Sci  (ICBS), Fac. Sci. Tanta   Univ, 27-28 April 2002, vol. 2: 109-119.

51.    Weidner S., Fraczek E., Romanowska M., Amarowicz R., Abe S., Davies E. 2003. The influence of abscisic acid on different polysomal populations in embryonal tissue during pea seeds germination. Acta Physiol. Plant, 2003, 25: 5-12

52. Shunnosuke Abe, Kishu Azama, Hideki Sugimotb, Eric Davies. Protein accumulation in the maize endosperm: Role of polyribosomes and the cytoskeleton. Plant Physiology and Biochemistry, Volume 41, 2003 Issue 2, Pages 125-131

53. Tomomi Yamagata, Hisanao Kato, Satoshi Kuroda, Shunnosuke Abe,, and Eric Davies Uncleaved legumin in developing maize endosperm: Identification, accumulation and sub-cellular localization. Journal of Experimental Botany, 2003, March, 54(384) i913-922

54. Shunnosuke Abe, Masako Sakai, Kosaku Yagi, Takehiko Hagino, Katsumasa Ochi, Koichi Shibata, Eric Davies.  A Tudor protein with multiple SNc domains from pea seedlings: cellular localization, partial characterization, sequence analysis and phylogenetic relationships. Journal of Experimental Botany, 2003 March, 54(384) 971-983

55. Kishu Azama, Shunnosuke Abe, Hideki Sugimoto,  Eric Davies. Lysine-containing proteins in maize endosperm: a major contribution from cytoskeleton-associated carbohydrate metabolizing enzymes. PLANTA (2003)  217: 628 - 638

56. Mahmoud F.M. Moustafa*, Motohito Yoneda, Shunnosuke Abe, Eric Davies. Changes in isotypes and enzyme activity of apyrase during germination of dark-grown pea (Pisum sativum L. var. Alaska) seedlings. Physiol. Plant 2003, in press.

57. S. Kuroda, M. Hakata, Y. Hirose, S. Abe  2003. Ethylene production and enhanced transcription of an ethylene receptor gene, ERS1, in Delphinium during abscission of florets  Plant Physiology and Biochemistry, Volume 41, Issue 9 (2003 September),

58. Yasuo Watanabe, Masataka Hirasaki, Naoko Tohnai, KohsakuYagi, Shunnosuke Abe,and Youichi Tamai. 2003. Salt-shock induces the expression of ZrATP2, the gene for themitochondrial ATPaseβ subunit of Zygosaccharomyces rouxii. Journal of Bioscience and Biotechnology: 812-820.

59. Chhoun Chamnan,Shunnosuke Abe*, Masanobu Doi, Shigeki Chiba and Todd A. Gray (2003). The genomic organization of MKRN1, and expression profiles of MKRN1, MKRN2, and RAF1 in yellowtail fish (Seriola quinqueradiata). Journal of Egyptian-German Society of Zoology (2003) 43C :57-75

60.Monika Kosowska, Ewa Fr?czek, Ryszard Amarowicz, Magdalena Karamac, Shunnosuke Abe, Stanislav Weidner.  Water-deficit-induced changes in cytoskeleton-bound and other polysomal populations in embryonic tissue during triticale caryopsis germination. Acta Physiol. Plant 2004, in press.

  To number 61 to the latest

 

 

Other publications or Abstracts


1 Abe S, Ito Y, Davies E.(1994). Association of cytoskeletal proteins in the
membrane-bound polysome fraction from peas using conventional polysome
  
isolation buffers. Plant Physiology and Biochemistry 32 (4) (1994) Cover page


 
2  Davies E, Ramaiah KVA, Abe S. (1984). Wounding inhibits protein synthesis
while stimulating polysome formation. Supplement to Plant Physiology 75: 605a.

3 Davies E, Abe S. (1989). Isolation and role for cytoskeleton-bound polysomes
in a variety of plants. Supplement to Plant physiology 89: 71.

4 Abe S, Fillingham BD, Davies E. Isolation and role for cytoskeleton-bound
polysomes from etiolated pea stems. Supplement to Plant Physiology 89: 71.
1989

5 Davies E, Abe S, Comer EC, Fillingham BD, Lionberger JM, Meyer JP, You W.
 
Cytoskeleton-bound polysomes in plants. Do they exist? UCLA symposia 1990,
Journal of Cellular Biochemistry vol. 14A: B403. 1990


6 Takeda J, Abe S. Effect of trans-cinnamic acid on mRNA levels and
activities of light induced anthocyanin synthesizing enzymes of carrot cell
suspension. 7th International Congress on Plant Tissue and Cell Culture (1990),
Abstract: C8-35.
                 1990

7 Abe S, Ito Y, Davies E. Isolation of cytoskeletal fragments from peas.
Supplement to Plant Physiology 96:862.
 1991

8 Davies E, Fillingham BD, Abe S, Comer E, Lionberger J. Release of
polysomes from cytoskeleton fractions isolated from pea stems and corn
endosperm. In: Molecular Biology of Plant Growth and Development, 3rd Int.
Congress Plant Molecular Biology, 3: 431A. 1991

9. Stankovic B, Abe S, Davies E. Cytomatrix polysomes in corn endosperm.
Supplement to Plant Physiology 102 (suppl) 503. 1993


10 Davies E, Garic-Stankovic A, Stankovic B, Ito Y, Abe S. Cytoskeleton-
polysomes-membrane complexes in pea stems. Supplement to Plant Physiology
102: 504. 1993

11 Stankovic B, Abe S, Davies E. Cytomatrix polysomes in corn endosperm.
Supplement to Plant Physiology 102: 503.
 平成5年

12 Ito Y, Abe S, Davies E. Identification of translational unit in plants. XV
International Botanical Congress, Yokohama, Japan. August28-September 3,
Abstract:3028.
 1993

13 Abe S, Ito Y, Doi H, Azama K, Shibata K, Davies E. Reconstruction of
cytoskeleton bound polysosomes in vitro and investigation of ribosome
binding sites on the cytoskeleton. XV International Botanical Congress,
Yokohama, Japan. August 28-September 3, Abstract:3029.
  1993

14 Abe S, Doi H, Nakai Y, Ito Y, Nonami H, Davies E. Distribution of strept-
avidin-binding proteins in various organisms. XV International Botanical
Congress, Yokohama, Japan. August 28-September, Abstract:3030.
  1993

15
 Nakai Y, Nonami H, Fukuyama T, Abe S, Hashimoto Y. Relations between
calcium availability and cytoskeleton formation of cells of tomato fuits
 
suffered from blossom-end rot. XXIVth International Horticultural Congress,
Kyoto, 21-27 August 1994. Abstract P-14-10/Plant Physiological Asspects.


16 Ito Y, Abe S, Davies E, 1995. Characterization and structure of a
ribosome-sedimenting protein isolated from the cytoskeleton fraction of
higher plant cells. The Annual Meeting and 35th Symposia of Japanese Plant
Physiologists 1995, March 28-30, Matsue, Shimane: 2aG10. Supplement to Plant
Cell Physiology 36,s80.

17 Ito Y., Abe S., Davies E. 1996
  Isolation of a ribosome-sedimenting protein using
a heparin affinity colomn and analysis of the cDNA encoding the protein.

18 Abe S., Davies E., 1996. Isolation of cytoskeleton proteins from plant cells using a
heparin-affinity column.

19 Ito Y., Abe S., Davies E. 1996 Isolation of a ribosome-sedimenting protein using a
heparin affinity colomn and analysis of the cDNA encoding the protein. supplement
to Plant Cell Physiology

20 Okamoto T., Shibata K., Abe S., Davies E. 1996. Isolation and identification of
cytoskeleton proteins from plant cells -A 54kDa protein. supplement to Plant
Cell Physiology


21 Shibata K., Okamoto T., Abe S., Davies E., 1996. Isolation and identification of
cytoskeleton proteins from plant cells -A 49 kDa protein. supplement to Plant Cell
Physiology

22 Abe S., Davies E., 1996. Isolation of cytoskeleton proteins from plant cells using a
heparin-affinity column. supplement to Plant Cell Physiology


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